Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CFA70_RS10185 | Not Available | Negative | 1941420 - 1942112 | 26575.9 |
| voc family protein | CFA70_RS10190 | Not Available | Negative | 1942136 - 1942501 | 13014.5 |
| protein translocase subunit secf | CFA70_RS10195 | Not Available | Negative | 1942670 - 1943641 | 35299.5 |
| protein translocase subunit secd | CFA70_RS10200 | Not Available | Negative | 1943652 - 1945499 | 66577.0 |
| preprotein translocase subunit yajc | CFA70_RS10205 | Not Available | Negative | 1945527 - 1945859 | 11845.8 |
| trna guanosine(34) transglycosylase tgt | CFA70_RS10210 | Not Available | Negative | 1945882 - 1947009 | 42540.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | CFA70_RS10215 | Not Available | Negative | 1947065 - 1948135 | 39430.1 |
| acp phosphodiesterase | CFA70_RS10220 | Not Available | Positive | 1948226 - 1948807 | 23204.5 |
| peroxiredoxin | CFA70_RS10225 | Not Available | Positive | 1948976 - 1949578 | 22264.5 |
| sel1-like repeat protein | CFA70_RS10230 | Not Available | Negative | 1949744 - 1950718 | 37760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

