Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CFA70_RS27705 | Not Available | Negative | 17897 - 20587 | 98138.3 |
| tetr/acrr family transcriptional regulator | CFA70_RS27710 | Not Available | Negative | 21028 - 21585 | 20530.9 |
| is5 family transposase | CFA70_RS27715 | Not Available | Positive | 21631 - 22605 | 36630.1 |
| multidrug efflux rnd transporter periplasmic adaptor subunit tmexc2 | CFA70_RS27720 | Not Available | Positive | 22919 - 24082 | 41698.7 |
| multidrug efflux rnd transporter permease subunit tmexd2 | CFA70_RS27725 | Not Available | Positive | 24098 - 27232 | 112022.0 |
| multidrug efflux transporter outer membrane subunit toprj2 | CFA70_RS27730 | Not Available | Positive | 27237 - 28670 | 51547.7 |
| hypothetical protein | CFA70_RS29180 | Not Available | Negative | 28840 - 28989 | 5360.41 |
| single-stranded dna-binding protein | CFA70_RS27735 | Not Available | Positive | 29100 - 30074 | 36217.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | CFA70_RS27740 | Not Available | Positive | 30241 - 30492 | 9202.99 |
| type ii toxin-antitoxin system rele family toxin | CFA70_RS27745 | Not Available | Positive | 30489 - 30776 | 11133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

