Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria biosynthesis transcriptional regulator fimz | CFA70_RS09550 | Not Available | Positive | 1817609 - 1818241 | 23625.9 |
| fimbria assembly protein | CFA70_RS09555 | Not Available | Negative | 1818291 - 1818785 | 17150.2 |
| type 1 fimbria d-mannose specific adhesin fimh | CFA70_RS09560 | Not Available | Negative | 1818820 - 1819782 | 34685.9 |
| fimbrial biogenesis usher protein | CFA70_RS09565 | Not Available | Negative | 1819832 - 1822453 | 95398.5 |
| type 1 fimbria chaperone fimc | CFA70_RS09570 | Not Available | Negative | 1822461 - 1823153 | 25082.4 |
| type 1 fimbrial protein subunit fimi | CFA70_RS09575 | Not Available | Negative | 1823195 - 1823728 | 18979.8 |
| type 1 fimbrial major subunit fima | CFA70_RS09580 | Not Available | Negative | 1823806 - 1824360 | 18649.8 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CFA70_RS09585 | Not Available | Positive | 1824932 - 1825798 | 30940.6 |
| ribosome-associated protein ybcj | CFA70_RS09590 | Not Available | Positive | 1825800 - 1826012 | 7420.03 |
| metal-dependent hydrolase | CFA70_RS09595 | Not Available | Positive | 1826138 - 1826662 | 19541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

