Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj family molecular chaperone | CFA70_RS09400 | Not Available | Positive | 1778678 - 1779853 | 45816.0 |
| hypothetical protein | CFA70_RS09405 | Not Available | Negative | 1779871 - 1780041 | 6294.77 |
| luxr c-terminal-related transcriptional regulator | CFA70_RS09410 | Not Available | Positive | 1780470 - 1781048 | 21860.7 |
| autotransporter outer membrane beta-barrel domain-containing protein | CFA70_RS09415 | Not Available | Positive | 1781245 - 1790583 | 318095.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CFA70_RS09420 | Not Available | Negative | 1790737 - 1791504 | 28404.2 |
| helix-turn-helix domain-containing protein | CFA70_RS09425 | Not Available | Negative | 1791605 - 1792186 | 22241.2 |
| flagellar brake protein | CFA70_RS09430 | Not Available | Negative | 1792208 - 1792903 | 26930.3 |
| duf968 domain-containing protein | CFA70_RS09435 | Not Available | Negative | 1793481 - 1793945 | 17052.7 |
| is1-like element is1b family transposase | CFA70_RS09445 | Not Available | Positive | 1794001 - 1794698 | 26558.3 |
| duf968 domain-containing protein | CFA70_RS09450 | Not Available | Negative | 1794713 - 1795786 | 39187.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

