Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase ybix | CFA70_RS07740 | Not Available | Positive | 1478672 - 1479349 | 25299.7 |
| dksa/trar family c4-type zinc finger protein | CFA70_RS07745 | Not Available | Positive | 1479425 - 1479691 | 9627.01 |
| duf1471 family protein ybij | CFA70_RS07750 | Not Available | Positive | 1479995 - 1480255 | 8572.32 |
| malate/lactate/ureidoglycolate dehydrogenase | CFA70_RS07755 | Not Available | Negative | 1480353 - 1481438 | 38907.5 |
| dna-binding protein ybib | CFA70_RS07760 | Not Available | Negative | 1481601 - 1482569 | 35111.8 |
| atp-dependent dna helicase ding | CFA70_RS07765 | Not Available | Negative | 1482599 - 1484749 | 81304.6 |
| atp-dependent rna helicase rhle | CFA70_RS07770 | Not Available | Negative | 1484846 - 1486192 | 49247.4 |
| transcriptional regulator cecr | CFA70_RS07775 | Not Available | Positive | 1486414 - 1487091 | 25089.1 |
| secretion protein hlyd | CFA70_RS07780 | Not Available | Positive | 1487088 - 1488083 | 36302.9 |
| atp-binding cassette domain-containing protein | CFA70_RS07785 | Not Available | Positive | 1488076 - 1489812 | 62938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

