Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5-like element isec35 family transposase | CFA70_RS07300 | Not Available | Positive | 1395323 - 1396240 | 34376.9 |
| duf968 domain-containing protein | CFA70_RS07305 | Not Available | Positive | 1396298 - 1396447 | 4917.91 |
| dmt family transporter | CFA70_RS07310 | Not Available | Negative | 1396460 - 1397374 | 33358.7 |
| lysr family transcriptional regulator | CFA70_RS07315 | Not Available | Positive | 1397477 - 1398391 | 34766.2 |
| tetr/acrr family transcriptional regulator | CFA70_RS07320 | Not Available | Negative | 1398397 - 1398945 | 20920.4 |
| mfs transporter | CFA70_RS07325 | Not Available | Positive | 1399031 - 1400239 | 42064.2 |
| cof-type had-iib family hydrolase | CFA70_RS07330 | Not Available | Positive | 1400239 - 1401054 | 30560.1 |
| hypothetical protein | CFA70_RS07335 | Not Available | Positive | 1401162 - 1401443 | 9776.86 |
| mfs transporter | CFA70_RS07340 | Not Available | Negative | 1401472 - 1402704 | 44248.6 |
| undecaprenyl-diphosphate phosphatase | CFA70_RS07345 | Not Available | Positive | 1403003 - 1403611 | 22787.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

