Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf968 domain-containing protein | CFA70_RS06105 | Not Available | Negative | 1156246 - 1156467 | 7830.4 |
| ferric citrate uptake sigma factor feci | CFA70_RS06110 | Not Available | Positive | 1156691 - 1157212 | 19372.4 |
| ferric citrate uptake sigma factor regulator fecr | CFA70_RS06115 | Not Available | Positive | 1157209 - 1158162 | 35371.6 |
| duf968 domain-containing protein | CFA70_RS06120 | Not Available | Positive | 1158249 - 1160484 | 80808.7 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | CFA70_RS06125 | Not Available | Positive | 1160542 - 1161444 | 32874.6 |
| iron-dicitrate abc transporter permease fecc | CFA70_RS06130 | Not Available | Positive | 1161441 - 1162439 | 35103.3 |
| fe(3+) dicitrate abc transporter permease subunit fecd | CFA70_RS06135 | Not Available | Positive | 1162436 - 1163392 | 33887.1 |
| fe(3+) dicitrate abc transporter atp-binding protein fece | CFA70_RS06140 | Not Available | Positive | 1163393 - 1164160 | 28018.1 |
| arac family transcriptional regulator n-terminal domain-containing protein | CFA70_RS30025 | Not Available | Negative | 1164250 - 1164465 | 8153.17 |
| is30-like element iscfr4 family transposase | CFA70_RS06150 | Not Available | Positive | 1164673 - 1165833 | 44428.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

