Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein paay | CFA70_RS06005 | Not Available | Negative | 1138157 - 1138753 | 21188.7 |
| phenylacetic acid degradation operon negative regulatory protein paax | CFA70_RS06010 | Not Available | Negative | 1138765 - 1139691 | 34409.8 |
| phenylacetate--coa ligase paak | CFA70_RS06015 | Not Available | Negative | 1139850 - 1141166 | 48716.4 |
| 3-oxoadipyl-coa thiolase | CFA70_RS06020 | Not Available | Negative | 1141195 - 1142400 | 42427.2 |
| hydroxyphenylacetyl-coa thioesterase paai | CFA70_RS06025 | Not Available | Negative | 1142400 - 1142822 | 15007.9 |
| 3-hydroxyacyl-coa dehydrogenase | CFA70_RS06030 | Not Available | Negative | 1142815 - 1144233 | 51057.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | CFA70_RS06035 | Not Available | Negative | 1144237 - 1145025 | 28487.4 |
| 2,3-dehydroadipyl-coa hydratase paaf | CFA70_RS06040 | Not Available | Negative | 1145028 - 1145795 | 27340.9 |
| 1,2-phenylacetyl-coa epoxidase subunit paae | CFA70_RS06045 | Not Available | Negative | 1145792 - 1146862 | 38833.3 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | CFA70_RS06050 | Not Available | Negative | 1146870 - 1147370 | 18385.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

