Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | CFA70_RS05850 | Not Available | Positive | 1104758 - 1105672 | 34055.4 |
| hypothetical protein | CFA70_RS29565 | Not Available | Negative | 1105754 - 1105975 | 8300.26 |
| two-component system response regulator phop | CFA70_RS05855 | Not Available | Positive | 1106001 - 1106672 | 25511.7 |
| two-component system sensor histidine kinase phoq | CFA70_RS05860 | Not Available | Positive | 1106672 - 1108135 | 55303.6 |
| [50s ribosomal protein l16]-arginine 3-hydroxylase | CFA70_RS05865 | Not Available | Positive | 1108228 - 1109349 | 42672.3 |
| peptidase t | CFA70_RS05870 | Not Available | Negative | 1109452 - 1110678 | 44706.8 |
| spermidine/putrescine abc transporter atp-binding protein pota | CFA70_RS05880 | Not Available | Positive | 1110929 - 1112065 | 42953.6 |
| spermidine/putrescine abc transporter permease potb | CFA70_RS05885 | Not Available | Positive | 1112049 - 1112906 | 32232.3 |
| spermidine/putrescine abc transporter permease potc | CFA70_RS05890 | Not Available | Positive | 1112903 - 1113682 | 28526.2 |
| spermidine/putrescine abc transporter substrate-binding protein potd | CFA70_RS05895 | Not Available | Positive | 1113710 - 1114756 | 38996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

