Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFA70_RS05670 | Not Available | Negative | 1077030 - 1078097 | 41464.9 |
| duf968 domain-containing protein | CFA70_RS05675 | Not Available | Negative | 1078473 - 1078949 | 18738.5 |
| group ii intron reverse transcriptase/maturase | CFA70_RS05680 | Not Available | Negative | 1079030 - 1080538 | 58091.8 |
| duf968 domain-containing protein | CFA70_RS05695 | Not Available | Negative | 1081211 - 1081639 | 16889.4 |
| is30-like element is30 family transposase | CFA70_RS05705 | Not Available | Positive | 1081704 - 1082855 | 44283.5 |
| duf968 domain-containing protein | CFA70_RS05710 | Not Available | Negative | 1082868 - 1083113 | 9510.27 |
| is66 family transposase | CFA70_RS05715 | Not Available | Negative | 1083350 - 1084885 | 57790.1 |
| is66 family insertion sequence element accessory protein tnpb | CFA70_RS05720 | Not Available | Negative | 1084935 - 1085282 | 12759.9 |
| is66-like element accessory protein tnpa | CFA70_RS05725 | Not Available | Negative | 1085279 - 1085662 | 14384.7 |
| sir2 family protein | CFA70_RS05730 | Not Available | Positive | 1085849 - 1086934 | 41497.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

