Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | CFA70_RS05105 | Not Available | Negative | 974452 - 974649 | 7221.25 |
| translation initiation factor if-3 | CFA70_RS05110 | Not Available | Negative | 974746 - 975288 | 20438.0 |
| threonine--trna ligase | CFA70_RS05115 | Not Available | Negative | 975292 - 977220 | 74074.5 |
| small membrane protein ynid | CFA70_RS05120 | Not Available | Positive | 977525 - 977632 | 4131.51 |
| ydiy family protein | CFA70_RS05125 | Not Available | Negative | 977797 - 978555 | 27671.8 |
| duf968 domain-containing protein | CFA70_RS05130 | Not Available | Positive | 978843 - 979771 | 33440.3 |
| duf968 domain-containing protein | CFA70_RS05135 | Not Available | Positive | 980040 - 980899 | 33079.9 |
| ynib family protein | CFA70_RS05140 | Not Available | Negative | 980964 - 981500 | 20386.4 |
| hexitol phosphatase hxpb | CFA70_RS05145 | Not Available | Positive | 981668 - 982336 | 24359.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | CFA70_RS05150 | Not Available | Positive | 982484 - 983245 | 27114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

