Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | CFA70_RS04520 | Not Available | Positive | 852064 - 852558 | 18280.2 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CFA70_RS04525 | Not Available | Positive | 852576 - 854540 | 73954.3 |
| glutathione peroxidase | CFA70_RS04530 | Not Available | Positive | 854625 - 855107 | 17612.3 |
| ai-2e family transporter | CFA70_RS04535 | Not Available | Positive | 855273 - 856382 | 40304.1 |
| diguanylate cyclase | CFA70_RS04540 | Not Available | Positive | 856502 - 858286 | 66559.3 |
| tryptophan--trna ligase | CFA70_RS04545 | Not Available | Positive | 858488 - 859492 | 36597.5 |
| hypothetical protein | CFA70_RS04550 | Not Available | Negative | 859601 - 860644 | 40672.6 |
| duf262 domain-containing protein | CFA70_RS04555 | Not Available | Positive | 862057 - 863118 | 40789.5 |
| mae_28990/mae_18760 family hepn-like nuclease | CFA70_RS04560 | Not Available | Positive | 863115 - 863762 | 24750.8 |
| hypothetical protein | CFA70_RS04565 | Not Available | Negative | 864042 - 864254 | 8031.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

