Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase | CFA70_RS27105 | Not Available | Positive | 81858 - 83024 | 40787.3 |
| is6-like element is26 family transposase | CFA70_RS27115 | Not Available | Positive | 83126 - 83845 | 28356.4 |
| is1-like element is1a family transposase | CFA70_RS27120 | Not Available | Positive | 83874 - 84571 | 26515.3 |
| cpbp family intramembrane glutamic endopeptidase | CFA70_RS30010 | Not Available | Negative | 84709 - 85359 | 25296.7 |
| hypothetical protein | CFA70_RS30065 | Not Available | Negative | 85592 - 85954 | 11671.5 |
| recombinase family protein | CFA70_RS27145 | Not Available | Negative | 86083 - 86742 | 25677.7 |
| is110 family transposase | CFA70_RS27150 | Not Available | Positive | 87078 - 88100 | 37704.6 |
| methyltransferase family protein | CFA70_RS27155 | Not Available | Negative | 88424 - 88888 | 17773.4 |
| 1,4-alpha-glucan branching enzyme | CFA70_RS27160 | Not Available | Negative | 89134 - 90791 | 60342.5 |
| arsr/smtb family transcription factor | CFA70_RS27165 | Not Available | Positive | 90952 - 91302 | 12959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

