Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFA70_RS29535 | Not Available | Negative | 659422 - 660144 | 26873.8 |
| hypothetical protein | CFA70_RS03475 | Not Available | Negative | 660111 - 661958 | 71349.2 |
| integrase | CFA70_RS03480 | Not Available | Negative | 661955 - 663625 | 63391.5 |
| site-specific integrase | CFA70_RS03485 | Not Available | Negative | 663588 - 665009 | 55379.9 |
| isncy-like element iskpn21 family transposase | CFA70_RS03490 | Not Available | Positive | 665376 - 666779 | 53501.2 |
| duf6904 family protein | CFA70_RS03495 | Not Available | Negative | 666808 - 667440 | 24812.4 |
| isncy-like element iskpn21 family transposase | CFA70_RS03500 | Not Available | Positive | 667659 - 669062 | 53501.2 |
| duf6904 family protein | CFA70_RS03505 | Not Available | Negative | 669091 - 669723 | 24812.4 |
| duf968 domain-containing protein | CFA70_RS03510 | Not Available | Negative | 669901 - 670364 | 17492.9 |
| trans-aconitate 2-methyltransferase | CFA70_RS03515 | Not Available | Positive | 670475 - 671233 | 28937.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

