Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria/pilus outer membrane usher protein | CFA70_RS03355 | Not Available | Positive | 636748 - 639234 | 90858.0 |
| fimbrial protein | CFA70_RS03360 | Not Available | Positive | 639225 - 640199 | 34399.1 |
| duf968 domain-containing protein | CFA70_RS03365 | Not Available | Positive | 640214 - 640774 | 20005.4 |
| is5-like element is903b family transposase | CFA70_RS03370 | Not Available | Negative | 640833 - 641801 | 36656.0 |
| dps family protein | CFA70_RS03375 | Not Available | Negative | 642099 - 642575 | 17933.3 |
| duf968 domain-containing protein | CFA70_RS03380 | Not Available | Negative | 642699 - 643646 | 35233.0 |
| is6-like element is26 family transposase | CFA70_RS03390 | Not Available | Positive | 643712 - 644416 | 27896.9 |
| non-heme ferritin-like protein | CFA70_RS03400 | Not Available | Positive | 644743 - 645243 | 19032.6 |
| is5-like element iskpn26 family transposase | CFA70_RS03410 | Not Available | Negative | 645560 - 646540 | 37816.6 |
| succinylglutamate desuccinylase/aspartoacylase family protein | CFA70_RS03415 | Not Available | Positive | 646594 - 646908 | 11130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

