Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | CFA70_RS03295 | Not Available | Positive | 626071 - 626907 | 32275.7 |
| hachiman antiphage defense system protein hama | CFA70_RS03300 | Not Available | Positive | 627563 - 628342 | 28410.9 |
| dead/deah box helicase | CFA70_RS03305 | Not Available | Positive | 628326 - 631859 | 130515.0 |
| duf968 domain-containing protein | CFA70_RS03310 | Not Available | Positive | 631989 - 632177 | 7471.75 |
| helix-turn-helix domain-containing protein | CFA70_RS03320 | Not Available | Negative | 632439 - 632735 | 11099.5 |
| is1-like element is1b family transposase | CFA70_RS03330 | Not Available | Positive | 633106 - 633803 | 26586.4 |
| type 3 fimbria major subunit mrka | CFA70_RS03340 | Not Available | Positive | 634143 - 634751 | 20712.0 |
| duf968 domain-containing protein | CFA70_RS28995 | Not Available | Positive | 634945 - 635022 | 2946.68 |
| is30 family transposase | CFA70_RS03345 | Not Available | Negative | 635057 - 636004 | 35828.8 |
| duf968 domain-containing protein | CFA70_RS03350 | Not Available | Positive | 636110 - 636736 | 22344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

