Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CFA70_RS03195 | Not Available | Positive | 597292 - 599238 | 69881.1 |
| helix-turn-helix domain-containing protein | CFA70_RS03200 | Not Available | Positive | 599415 - 599729 | 11481.0 |
| type ii toxin-antitoxin system hipa family toxin | CFA70_RS03205 | Not Available | Positive | 599722 - 600993 | 47288.3 |
| hypothetical protein | CFA70_RS03210 | Not Available | Positive | 601048 - 601569 | 19321.2 |
| glycoside hydrolase family 10 protein | CFA70_RS03215 | Not Available | Negative | 601566 - 602933 | 51485.1 |
| vf530 family dna-binding protein | CFA70_RS03220 | Not Available | Negative | 602946 - 603233 | 10906.8 |
| hlyd family type i secretion periplasmic adaptor subunit | CFA70_RS03225 | Not Available | Negative | 603368 - 604696 | 49223.6 |
| type i secretion system permease/atpase | CFA70_RS03230 | Not Available | Negative | 604696 - 606435 | 62942.5 |
| peroxidase family protein | CFA70_RS03235 | Not Available | Negative | 606446 - 611776 | 187591.0 |
| is30 family transposase | CFA70_RS03240 | Not Available | Negative | 612611 - 613558 | 35828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

