Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | CFA70_RS03045 | Not Available | Negative | 564283 - 564663 | 14500.2 |
| recombinase family protein | CFA70_RS03050 | Not Available | Positive | 565238 - 565798 | 21288.5 |
| tn3-like element tnas1 family transposase | CFA70_RS03055 | Not Available | Positive | 565802 - 568768 | 111688.0 |
| duf968 domain-containing protein | CFA70_RS03060 | Not Available | Negative | 568765 - 569751 | 36188.2 |
| is30 family transposase | CFA70_RS03065 | Not Available | Negative | 569786 - 570733 | 35828.8 |
| hypothetical protein | CFA70_RS29240 | Not Available | Positive | 570674 - 570928 | 9550.79 |
| aromatic amino acid efflux dmt transporter yddg | CFA70_RS03070 | Not Available | Negative | 571402 - 572283 | 31457.4 |
| formate dehydrogenase-n subunit alpha | CFA70_RS03080 | Not Available | Positive | 572571 - 575618 | 112823.0 |
| formate dehydrogenase n subunit beta | CFA70_RS03085 | Not Available | Positive | 575632 - 576516 | 32333.5 |
| formate dehydrogenase-n subunit gamma | CFA70_RS03090 | Not Available | Positive | 576509 - 577165 | 25641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

