Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CFA70_RS02795 | Not Available | Positive | 512453 - 512989 | 19918.6 |
| peptidase u32 family protein | CFA70_RS02800 | Not Available | Positive | 513069 - 515030 | 72992.4 |
| duf2554 family protein | CFA70_RS02805 | Not Available | Negative | 515034 - 515264 | 8649.1 |
| duf2474 domain-containing protein | CFA70_RS02810 | Not Available | Negative | 515454 - 515579 | 4644.03 |
| cytochrome d ubiquinol oxidase subunit ii | CFA70_RS02815 | Not Available | Negative | 515579 - 516589 | 37017.2 |
| cytochrome ubiquinol oxidase subunit i | CFA70_RS02820 | Not Available | Negative | 516589 - 517992 | 51930.7 |
| plp-dependent aminotransferase family protein | CFA70_RS02825 | Not Available | Positive | 518401 - 519810 | 53005.0 |
| putative abc transporter substrate-binding protein ydcs | CFA70_RS02830 | Not Available | Positive | 520138 - 521283 | 42148.2 |
| abc transporter atp-binding protein | CFA70_RS02835 | Not Available | Positive | 521300 - 522316 | 37194.9 |
| abc transporter permease | CFA70_RS02840 | Not Available | Positive | 522317 - 523261 | 34539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

