Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | CFA70_RS02635 | Not Available | Positive | 480962 - 481759 | 29436.9 |
| aldehyde dehydrogenase | CFA70_RS02640 | Not Available | Positive | 481965 - 483404 | 52269.9 |
| alpha/beta hydrolase | CFA70_RS02645 | Not Available | Negative | 483446 - 484372 | 33963.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CFA70_RS02650 | Not Available | Negative | 484499 - 485500 | 35933.1 |
| cytochrome b561 | CFA70_RS02655 | Not Available | Positive | 485690 - 486220 | 20111.7 |
| translesion error-prone dna polymerase v autoproteolytic subunit | CFA70_RS02660 | Not Available | Positive | 486393 - 486812 | 15102.3 |
| y-family dna polymerase | CFA70_RS02665 | Not Available | Positive | 486815 - 488083 | 47631.4 |
| formate dehydrogenase-n subunit gamma | CFA70_RS02670 | Not Available | Negative | 488193 - 488846 | 25431.0 |
| formate dehydrogenase subunit beta | CFA70_RS02675 | Not Available | Negative | 488839 - 489726 | 32269.4 |
| formate dehydrogenase-n subunit alpha | CFA70_RS02680 | Not Available | Negative | 489739 - 492789 | 112904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

