Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | CFA70_RS02525 | Not Available | Negative | 457259 - 458194 | 35390.7 |
| universal stress protein uspf | CFA70_RS02530 | Not Available | Negative | 458393 - 458827 | 15804.2 |
| ktsc domain-containing protein | CFA70_RS02535 | Not Available | Negative | 458909 - 459121 | 8072.78 |
| porin ompc | CFA70_RS02540 | Not Available | Negative | 459268 - 460398 | 41081.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | CFA70_RS02545 | Not Available | Negative | 460765 - 464289 | 128592.0 |
| duf333 domain-containing protein | CFA70_RS02555 | Not Available | Positive | 464564 - 464830 | 8711.48 |
| heat shock protein hslj | CFA70_RS02560 | Not Available | Negative | 464844 - 465263 | 15098.5 |
| 2-hydroxyacid dehydrogenase | CFA70_RS02565 | Not Available | Negative | 465376 - 466365 | 36515.9 |
| ydbh family protein | CFA70_RS02575 | Not Available | Positive | 466981 - 469620 | 97220.7 |
| ynbe family lipoprotein | CFA70_RS02580 | Not Available | Positive | 469617 - 469808 | 6929.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

