Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria/pilus outer membrane usher protein | CFA70_RS01715 | Not Available | Negative | 297837 - 300122 | 82001.2 |
| molecular chaperone | CFA70_RS01720 | Not Available | Negative | 300178 - 300900 | 25882.3 |
| spore coat u domain-containing protein | CFA70_RS01725 | Not Available | Negative | 300915 - 301445 | 17707.7 |
| merr family transcriptional regulator | CFA70_RS01730 | Not Available | Negative | 301756 - 302487 | 28213.0 |
| duf968 domain-containing protein | CFA70_RS01735 | Not Available | Negative | 302691 - 303921 | 42896.9 |
| regulatory protein ycgz | CFA70_RS01740 | Not Available | Positive | 304239 - 304475 | 8899.74 |
| hypothetical protein | CFA70_RS01745 | Not Available | Positive | 304517 - 304789 | 10286.5 |
| biofilm development regulator ymgb/arir family protein | CFA70_RS01750 | Not Available | Positive | 304824 - 305090 | 9562.46 |
| luxr c-terminal-related transcriptional regulator | CFA70_RS01755 | Not Available | Positive | 305222 - 305773 | 21108.6 |
| mfs transporter | CFA70_RS01760 | Not Available | Negative | 305851 - 307110 | 47284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

