Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 705SK3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 705SK3 chromosome, complete genome.
Gene Summary
Adenine Count
1261781 bp
Thymine Count
1256013 bp
Guanine Count
1363062 bp
Cytosine Count
1361983 bp
Genome Length
5242839 bp
Protein-coding Genes
4615 genes
Non-Coding Genes
528 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | CES93_RS10315 | Not Available | Positive | 2060961 - 2061704 | 26485.0 |
| crossover junction endodeoxyribonuclease ruvc | CES93_RS10320 | Not Available | Positive | 2061739 - 2062260 | 18779.9 |
| holliday junction branch migration protein ruva | CES93_RS10325 | Not Available | Positive | 2062341 - 2062952 | 22147.1 |
| holliday junction branch migration dna helicase ruvb | CES93_RS10330 | Not Available | Positive | 2062961 - 2063971 | 37211.1 |
| zinc abc transporter permease subunit znub | CES93_RS10335 | Not Available | Negative | 2064050 - 2064835 | 27759.4 |
| zinc abc transporter atp-binding protein znuc | CES93_RS10340 | Not Available | Negative | 2064832 - 2065587 | 27776.2 |
| zinc abc transporter substrate-binding protein znua | CES93_RS10345 | Not Available | Positive | 2065666 - 2066610 | 34177.5 |
| murein dd-endopeptidase mepm | CES93_RS10350 | Not Available | Positive | 2066626 - 2067945 | 48798.2 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | CES93_RS10355 | Not Available | Positive | 2068065 - 2069036 | 37337.4 |
| pyruvate kinase | CES93_RS10360 | Not Available | Negative | 2069080 - 2070522 | 51451.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

