Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger abyssi |
| Strain | strain JLT2014 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
179 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | Ga0080574_RS23145 | Not Available | Negative | 4019660 - 4020055 | 14785.3 |
| peptide chain release factor 2 | Ga0080574_RS23150 | Not Available | Negative | 4020147 - 4021268 | 41516.3 |
| penicillin-binding protein 1a | Ga0080574_RS23155 | Not Available | Negative | 4021496 - 4024033 | 93052.3 |
| n-acetylmuramoyl-l-alanine amidase | Ga0080574_RS23160 | Not Available | Negative | 4024136 - 4025344 | 42727.6 |
| pyridoxal phosphate-dependent aminotransferase | Ga0080574_RS23165 | Not Available | Negative | 4025444 - 4026589 | 41802.8 |
| m48 family metalloprotease | Ga0080574_RS23170 | Not Available | Positive | 4026646 - 4027983 | 47533.1 |
| dsba family protein | Ga0080574_RS23175 | Not Available | Positive | 4028013 - 4028792 | 28309.7 |
| sensor histidine kinase | Ga0080574_RS23180 | Not Available | Negative | 4028809 - 4030161 | 48741.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | Ga0080574_RS23185 | Not Available | Negative | 4030166 - 4031296 | 40086.1 |
| helix-turn-helix domain-containing protein | Ga0080574_RS23190 | Not Available | Negative | 4031441 - 4033057 | 56835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
