Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus str. JLT2016
Accession NumberNZ_CP014803.1
Gene Summary
Adenine Count
22572 bp
Thymine Count
23144 bp
Guanine Count
32918 bp
Cytosine Count
32777 bp
Genome Length
111411 bp
Protein-coding Genes
104 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Ga0080559_RS23910 | Not Available | + | 245 - 580 | 12105.3 |
| hypothetical protein | Ga0080559_RS27340 | Not Available | - | 654 - 848 | 7423.16 |
| transposase | Ga0080559_RS23915 | Not Available | + | 1096 - 2346 | 45920.1 |
| mobq family relaxase | Ga0080559_RS23920 | Not Available | + | 2936 - 4426 | 55702.8 |
| dna-binding protein | Ga0080559_RS23925 | Not Available | - | 4696 - 5013 | 11737.7 |
| type ii toxin-antitoxin system vapc family toxin | Ga0080559_RS23930 | Not Available | - | 5016 - 5405 | 13671.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | Ga0080559_RS23935 | Not Available | - | 5414 - 5677 | 9893.84 |
| hypothetical protein | Ga0080559_RS26455 | Not Available | - | 5862 - 6020 | 6129.31 |
| replication initiator protein a | Ga0080559_RS23940 | Not Available | + | 6264 - 7295 | 39426.1 |
| helix-turn-helix domain-containing protein | Ga0080559_RS23945 | Not Available | + | 7490 - 7741 | 9262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.