Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger abyssi |
| Strain | strain JLT2014 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger abyssi strain JLT2014 plasmid pPABY6, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | Ga0080574_RS00680 | Not Available | Negative | 1309 - 2064 | 26164.8 |
| aminotransferase class iv | Ga0080574_RS00685 | Not Available | Negative | 2061 - 2990 | 34062.8 |
| histone deacetylase family protein | Ga0080574_RS00690 | Not Available | Negative | 3014 - 4039 | 37040.4 |
| rida family protein | Ga0080574_RS26135 | Not Available | Positive | 4568 - 4963 | 14034.7 |
| amidase | Ga0080574_RS00700 | Not Available | Positive | 4960 - 6378 | 49701.4 |
| shikimate dehydrogenase family protein | Ga0080574_RS00705 | Not Available | Positive | 6382 - 7185 | 27375.2 |
| thiamine pyrophosphate-dependent enzyme | Ga0080574_RS00710 | Not Available | Positive | 7279 - 9471 | 78900.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | Ga0080574_RS00715 | Not Available | Positive | 9483 - 10721 | 42904.5 |
| hypothetical protein | Ga0080574_RS25725 | Not Available | Positive | 10764 - 11006 | 8636.44 |
| isochorismatase family cysteine hydrolase | Ga0080574_RS00720 | Not Available | Negative | 11222 - 11908 | 25168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
