Salipiger abyssi strain JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi strain JLT2014 is a Gram-negative, rod-shaped bacterium. This organism is notable for having a total of eight replicons, which may reflect its adaptability and genetic diversity. The strain is cataloged under several accessions, including NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, NZ_CP015097.1, and NZ_CP015095.1. These accessions provide a comprehensive genetic framework for further research and characterization of the strain. The presence of multiple replicons in Salipiger abyssi strain JLT2014 could suggest a complex evolutionary history and may play a role in its metabolic versatility. This characteristic is often associated with the ability of bacteria to thrive in diverse environments, which aligns with the ecological niches typically occupied by members of the Salipiger genus. Understanding the genetic structure and traits of Salipiger abyssi strain JLT2014 can provide insights into its role within marine ecosystems, particularly in relation to nutrient cycling and interactions with other microbial communities. The ecological implications of its adaptability and genetic complexity may offer valuable perspectives on microbial life in extreme environments, such as deep-sea habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
Strainstrain JLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1513 domain-containing proteinGa0080574_RS18565Not AvailablePositive3082639 - 308371238039.0
Trna-valNot AvailableNot AvailablePositive3083808 - 3083882Not Available
Trna-valNot AvailableNot AvailablePositive3084077 - 3084152Not Available
thiamine pyrophosphate-requiring proteinGa0080574_RS18580Not AvailablePositive3084371 - 308607160991.8
alpha-hydroxy acid oxidaseGa0080574_RS18585Not AvailablePositive3086083 - 308729443161.4
tigr02444 family proteinGa0080574_RS18590Not AvailablePositive3087278 - 308779918917.7
ubix family flavin prenyltransferaseGa0080574_RS18595Not AvailableNegative3087806 - 308837820917.6
lysr family transcriptional regulatorGa0080574_RS18600Not AvailableNegative3088463 - 308939534395.5
ubid family decarboxylaseGa0080574_RS18605Not AvailablePositive3089522 - 309095851700.9
mandelate racemase/muconate lactonizing enzyme family proteinGa0080574_RS18610Not AvailablePositive3090951 - 309215642478.7

Displaying genes 3511 – 3520 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.