Salipiger abyssi strain JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi strain JLT2014 is a Gram-negative, rod-shaped bacterium. This organism is notable for having a total of eight replicons, which may reflect its adaptability and genetic diversity. The strain is cataloged under several accessions, including NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, NZ_CP015097.1, and NZ_CP015095.1. These accessions provide a comprehensive genetic framework for further research and characterization of the strain. The presence of multiple replicons in Salipiger abyssi strain JLT2014 could suggest a complex evolutionary history and may play a role in its metabolic versatility. This characteristic is often associated with the ability of bacteria to thrive in diverse environments, which aligns with the ecological niches typically occupied by members of the Salipiger genus. Understanding the genetic structure and traits of Salipiger abyssi strain JLT2014 can provide insights into its role within marine ecosystems, particularly in relation to nutrient cycling and interactions with other microbial communities. The ecological implications of its adaptability and genetic complexity may offer valuable perspectives on microbial life in extreme environments, such as deep-sea habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
Strainstrain JLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoglycoside phosphotransferase family proteinGa0080574_RS11265Not AvailablePositive1592679 - 159365634842.8
nucleotidyltransferase family proteinGa0080574_RS11270Not AvailablePositive1593641 - 159432124474.8
double-strand break repair protein addbGa0080574_RS11275Not AvailablePositive1594314 - 1597244108886.0
double-strand break repair helicase addaGa0080574_RS11280Not AvailablePositive1597241 - 1600618123202.0
thioredoxinGa0080574_RS11285Not AvailablePositive1600687 - 160100711357.5
aminomethyl-transferring glycine dehydrogenaseGa0080574_RS11290Not AvailableNegative1601123 - 1603972102707.0
glycine cleavage system protein gcvhGa0080574_RS11295Not AvailableNegative1604128 - 160448713109.3
glycine cleavage system aminomethyltransferase gcvtGa0080574_RS11300Not AvailableNegative1604507 - 160562539486.6
rrf2 family transcriptional regulatorGa0080574_RS11305Not AvailableNegative1605878 - 160636917571.2
gamma-glutamylcyclotransferase family proteinGa0080574_RS11310Not AvailablePositive1606463 - 160702920707.5

Displaying genes 2161 – 2170 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.