Salipiger abyssi strain JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi strain JLT2014 is a Gram-negative, rod-shaped bacterium. This organism is notable for having a total of eight replicons, which may reflect its adaptability and genetic diversity. The strain is cataloged under several accessions, including NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, NZ_CP015097.1, and NZ_CP015095.1. These accessions provide a comprehensive genetic framework for further research and characterization of the strain. The presence of multiple replicons in Salipiger abyssi strain JLT2014 could suggest a complex evolutionary history and may play a role in its metabolic versatility. This characteristic is often associated with the ability of bacteria to thrive in diverse environments, which aligns with the ecological niches typically occupied by members of the Salipiger genus. Understanding the genetic structure and traits of Salipiger abyssi strain JLT2014 can provide insights into its role within marine ecosystems, particularly in relation to nutrient cycling and interactions with other microbial communities. The ecological implications of its adaptability and genetic complexity may offer valuable perspectives on microbial life in extreme environments, such as deep-sea habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
Strainstrain JLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate-semialdehyde dehydrogenaseGa0080574_RS10515Not AvailableNegative1424884 - 142590637093.4
polysaccharide biosynthesis proteinGa0080574_RS10520Not AvailablePositive1426347 - 142822468013.5
log family proteinGa0080574_RS10525Not AvailableNegative1428295 - 142913731314.3
threonine/serine dehydrataseGa0080574_RS10530Not AvailablePositive1429216 - 143013331119.1
sialate o-acetylesteraseGa0080574_RS26795Not AvailableNegative1430158 - 143203566025.5
hypothetical proteinGa0080574_RS10540Not AvailableNegative1432136 - 143291527136.8
gscfa domain-containing proteinGa0080574_RS10545Not AvailableNegative1432942 - 143399438252.3
adenosylcobinamide-gdp ribazoletransferaseGa0080574_RS10550Not AvailableNegative1434067 - 143481624880.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseGa0080574_RS10555Not AvailableNegative1434813 - 143582334187.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseGa0080574_RS10560Not AvailableNegative1435825 - 143633117870.5

Displaying genes 2011 – 2020 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.