Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | strain JLT2016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus strain JLT2016 plasmid pTPRO4, complete
Gene Summary
Adenine Count
4838 bp
Thymine Count
4598 bp
Guanine Count
7808 bp
Cytosine Count
7875 bp
Genome Length
25119 bp
Protein-coding Genes
25 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | Ga0080559_RS01615 | Not Available | Negative | 307014 - 307910 | 34073.4 |
| rlua family pseudouridine synthase | Ga0080559_RS01620 | Not Available | Negative | 308152 - 309189 | 36759.2 |
| duf6476 family protein | Ga0080559_RS01625 | Not Available | Positive | 309188 - 309502 | 11318.5 |
| Trna-pseudo | Not Available | Not Available | Positive | 309621 - 309704 | Not Available |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | Ga0080559_RS01630 | Not Available | Positive | 309836 - 310615 | 28145.9 |
| hypothetical protein | Ga0080559_RS01635 | Not Available | Positive | 310660 - 310950 | 10636.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | Ga0080559_RS01640 | Not Available | Positive | 311118 - 312242 | 40345.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | Ga0080559_RS01645 | Not Available | Positive | 312242 - 312793 | 19354.9 |
| transcription antitermination factor nusb | Ga0080559_RS01650 | Not Available | Positive | 312790 - 313281 | 18288.8 |
| efflux transporter outer membrane subunit | Ga0080559_RS01655 | Not Available | Negative | 313621 - 315003 | 48423.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
