Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | strain JLT2016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus strain JLT2016 plasmid pTPRO4, complete
Gene Summary
Adenine Count
4838 bp
Thymine Count
4598 bp
Guanine Count
7808 bp
Cytosine Count
7875 bp
Genome Length
25119 bp
Protein-coding Genes
25 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | Ga0080559_RS17065 | Not Available | Positive | 3523581 - 3524330 | 26225.1 |
| type ii secretion system secretin gspd | Ga0080559_RS17070 | Not Available | Negative | 3524334 - 3526418 | 73561.5 |
| hypothetical protein | Ga0080559_RS17075 | Not Available | Negative | 3526638 - 3527147 | 18233.2 |
| type ii secretion system protein gspm | Ga0080559_RS17080 | Not Available | Negative | 3527144 - 3527725 | 20623.9 |
| piln domain-containing protein | Ga0080559_RS17085 | Not Available | Negative | 3527722 - 3528807 | 39549.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | Ga0080559_RS17090 | Not Available | Negative | 3528833 - 3529447 | 22156.2 |
| type ii secretion system protein j | Ga0080559_RS17095 | Not Available | Negative | 3529437 - 3529814 | 13169.9 |
| gsph/fimt family pseudopilin | Ga0080559_RS17100 | Not Available | Negative | 3529798 - 3530280 | 17079.5 |
| type ii secretion system major pseudopilin gspg | Ga0080559_RS17105 | Not Available | Negative | 3530264 - 3530716 | 15829.7 |
| type ii secretion system f family protein | Ga0080559_RS17110 | Not Available | Negative | 3530735 - 3531955 | 43493.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
