Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bola/ibag family iron-sulfur metabolism protein | AN936_RS03590 | Not Available | Positive | 766175 - 766408 | 8226.8 |
| grx4 family monothiol glutaredoxin | AN936_RS03595 | P73056 | Positive | 766460 - 766792 | 12397.0 |
| hypothetical protein | AN936_RS24990 | Not Available | Negative | 767008 - 767151 | 5241.09 |
| dutp diphosphatase | AN936_RS03600 | Q5KZ63 | Positive | 767126 - 767452 | 11347.8 |
| hypothetical protein | AN936_RS03605 | Not Available | Positive | 767610 - 767864 | 8522.28 |
| l,d-transpeptidase family protein | AN936_RS03610 | Not Available | Positive | 767864 - 769189 | 48159.2 |
| blai/meci/copy family transcriptional regulator | AN936_RS03615 | O07127 | Positive | 769552 - 769920 | 13471.1 |
| m56 family metallopeptidase | AN936_RS03620 | Not Available | Positive | 769917 - 771605 | 59181.7 |
| hypothetical protein | AN936_RS24585 | Not Available | Positive | 771741 - 772031 | 10529.0 |
| is21-like element helper atpase istb | AN936_RS03625 | Not Available | Negative | 772584 - 773312 | 27070.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
