Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | AN936_RS03395 | Not Available | Positive | 718761 - 719126 | 12910.4 |
| type ii secretion system minor pseudopilin gspj | AN936_RS03400 | Q00517 | Positive | 719123 - 719731 | 21475.9 |
| type ii secretion system minor pseudopilin gspk | AN936_RS03405 | P15750 | Positive | 719728 - 720732 | 34826.9 |
| type ii secretion system protein gspl | AN936_RS03410 | Not Available | Positive | 720734 - 721876 | 39552.2 |
| type ii secretion system protein gspm | AN936_RS03415 | Not Available | Positive | 721873 - 722355 | 16995.5 |
| type ii secretion system protein n | AN936_RS03420 | Not Available | Positive | 722358 - 723068 | 24164.7 |
| a24 family peptidase | AN936_RS03425 | P45794 | Positive | 723094 - 723846 | 26528.5 |
| peptidoglycan-associated lipoprotein pal | AN936_RS03430 | Not Available | Negative | 723833 - 724342 | 18203.4 |
| tol-pal system beta propeller repeat protein tolb | AN936_RS03435 | Q1GWC1 | Negative | 724456 - 725829 | 49195.2 |
| hypothetical protein | AN936_RS03440 | Not Available | Negative | 725835 - 726656 | 29043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
