Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AN936_RS03345 | Q1GVV2 | Negative | 705428 - 706711 | 44742.4 |
| Trna-leu | Not Available | Not Available | Positive | 706955 - 707041 | Not Available |
| hypothetical protein | AN936_RS03355 | Not Available | Positive | 707341 - 708909 | 53835.4 |
| tonb-dependent receptor domain-containing protein | AN936_RS03360 | Not Available | Positive | 708995 - 711691 | 98264.9 |
| type ii secretion system protein n | AN936_RS03365 | Not Available | Positive | 711959 - 712840 | 29743.1 |
| type ii secretion system secretin gspd | AN936_RS03370 | P35818 | Positive | 712845 - 715046 | 76910.2 |
| gspe/pule family protein | AN936_RS03375 | Q00512 | Positive | 715043 - 716536 | 53037.9 |
| type ii secretion system inner membrane protein gspf | AN936_RS03380 | Q00513 | Positive | 716529 - 717743 | 43767.2 |
| type ii secretion system major pseudopilin gspg | AN936_RS03385 | Q00514 | Positive | 717745 - 718233 | 17659.2 |
| gsph/fimt family protein | AN936_RS03390 | Not Available | Positive | 718274 - 718771 | 17441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
