Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | AN936_RS03145 | Not Available | Positive | 642549 - 645335 | 102275.0 |
| tonb-dependent receptor domain-containing protein | AN936_RS03150 | Not Available | Positive | 645447 - 648383 | 105320.0 |
| s9 family peptidase | AN936_RS03155 | Not Available | Positive | 648395 - 650410 | 73170.8 |
| phytanoyl-coa dioxygenase family protein | AN936_RS03160 | R9UTQ8 | Positive | 650907 - 651689 | 29514.9 |
| serine hydroxymethyltransferase | AN936_RS03165 | Q4J937 | Positive | 651772 - 653094 | 46586.9 |
| lysr substrate-binding domain-containing protein | AN936_RS03170 | Not Available | Negative | 653389 - 654282 | 32953.5 |
| tonb-dependent receptor | AN936_RS03175 | P42512 | Positive | 654778 - 657099 | 83280.2 |
| amidase | AN936_RS03180 | Q2IH94 | Positive | 657182 - 658747 | 53964.4 |
| dipeptidase | AN936_RS03185 | Q4WMJ8 | Positive | 658768 - 659841 | 38728.4 |
| pqq-dependent dehydrogenase, methanol/ethanol family | AN936_RS03190 | Q4W6G0 | Positive | 659881 - 661971 | 75515.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
