Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | AN936_RS03100 | Not Available | Negative | 634919 - 635521 | 21708.8 |
| large conductance mechanosensitive channel protein mscl | AN936_RS03105 | Q1GUG3 | Positive | 635640 - 636065 | 15013.7 |
| Tmrna,resume consensus sequence (at 213): gataagtgctaacgataa | Not Available | Not Available | Positive | 636221 - 636566 | Not Available |
| bon domain-containing protein | AN936_RS25370 | Not Available | Negative | 636657 - 637511 | 32540.4 |
| helix-turn-helix domain-containing protein | AN936_RS03115 | Q9HV30 | Negative | 637646 - 638059 | 15423.4 |
| cation transporter | AN936_RS03120 | Not Available | Positive | 638129 - 638749 | 21346.2 |
| hypothetical protein | AN936_RS03125 | Not Available | Negative | 638746 - 639591 | 29148.7 |
| hypothetical protein | AN936_RS03130 | Not Available | Negative | 639626 - 639910 | 10343.0 |
| lrp/asnc family transcriptional regulator | AN936_RS03135 | O59188 | Negative | 639974 - 640420 | 16453.0 |
| isoaspartyl peptidase/l-asparaginase | AN936_RS25840 | Q7CQV5 | Negative | 640420 - 642360 | 67615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
