Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | AN936_RS03050 | Q038L1 | Negative | 625243 - 625647 | 15076.7 |
| gatb/yqey domain-containing protein | AN936_RS03055 | Not Available | Negative | 625770 - 626222 | 16131.6 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AN936_RS03060 | O50235 | Positive | 626354 - 627550 | 41661.8 |
| carbamoyl-phosphate synthase large subunit | AN936_RS03065 | O50236 | Positive | 627843 - 631163 | 119471.0 |
| transcription elongation factor grea | AN936_RS03070 | Q1GUG9 | Positive | 631260 - 631736 | 17217.3 |
| rhomboid family intramembrane serine protease | AN936_RS03075 | Not Available | Positive | 631754 - 632389 | 21923.5 |
| hypothetical protein | AN936_RS03080 | Not Available | Negative | 632433 - 632765 | 12218.4 |
| nudix hydrolase | AN936_RS03085 | Q9P791 | Negative | 632821 - 633366 | 19252.0 |
| tpm domain-containing protein | AN936_RS03090 | Not Available | Negative | 633379 - 634059 | 24404.7 |
| ygcg family protein | AN936_RS03095 | Not Available | Negative | 634072 - 634860 | 27086.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
