Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing phosphodiesterase | AN936_RS02950 | Not Available | Positive | 600967 - 602163 | 42324.8 |
| transcription-repair coupling factor | AN936_RS02955 | Q1RI82 | Negative | 602272 - 605766 | 126241.0 |
| succinate dehydrogenase assembly factor 2 | AN936_RS02960 | Not Available | Negative | 605763 - 606029 | 10293.3 |
| atp-dependent dna helicase recg | AN936_RS02965 | B7UM74 | Positive | 606105 - 608171 | 74873.6 |
| pilz domain-containing protein | AN936_RS02970 | Not Available | Negative | 608197 - 608538 | 12709.7 |
| tyrosine--trna ligase | AN936_RS02975 | Q2G6I4 | Negative | 608613 - 609839 | 44752.9 |
| domon-like domain-containing protein | AN936_RS02980 | Not Available | Positive | 610021 - 610590 | 20840.3 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | AN936_RS02985 | P40407 | Positive | 610587 - 611792 | 44285.8 |
| dutp diphosphatase | AN936_RS02990 | Not Available | Positive | 611807 - 613050 | 43610.5 |
| duf817 domain-containing protein | AN936_RS02995 | O34535 | Negative | 613092 - 613946 | 32368.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
