Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding negative transcriptional regulator | AN936_RS02705 | Not Available | Negative | 546582 - 547298 | 25461.1 |
| rlua family pseudouridine synthase | AN936_RS02710 | P74346 | Negative | 547298 - 548512 | 43556.6 |
| fluoride efflux transporter crcb | AN936_RS02715 | Q1GRB2 | Negative | 548509 - 548889 | 13116.4 |
| thermonuclease family protein | AN936_RS02720 | Not Available | Negative | 548956 - 549408 | 16413.2 |
| marr family winged helix-turn-helix transcriptional regulator | AN936_RS02725 | Not Available | Positive | 549781 - 550830 | 37973.5 |
| Trna-val | Not Available | Not Available | Positive | 550886 - 550961 | Not Available |
| mfs transporter | AN936_RS02735 | Q47142 | Positive | 551143 - 552378 | 42574.1 |
| alpha/beta hydrolase | AN936_RS02740 | Q9EX73 | Positive | 552456 - 553379 | 32710.7 |
| long-chain fatty acid--coa ligase | AN936_RS02745 | Not Available | Negative | 553380 - 554966 | 57632.9 |
| alpha,alpha-trehalase tref | AN936_RS02750 | Q4UZ12 | Negative | 554994 - 556478 | 53698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
