Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | AN936_RS02555 | Not Available | Positive | 516727 - 517443 | 25004.8 |
| duf3363 domain-containing protein | AN936_RS02560 | Not Available | Positive | 517663 - 519408 | 63014.6 |
| dutp diphosphatase | AN936_RS02565 | Not Available | Positive | 519424 - 520830 | 51615.3 |
| p-type conjugative transfer protein trbj | AN936_RS02570 | Not Available | Positive | 521183 - 521902 | 25142.0 |
| putative entry exclusion protein trbk-alt | AN936_RS02575 | Not Available | Positive | 521868 - 522158 | 10045.1 |
| p-type conjugative transfer protein trbl | AN936_RS02580 | Not Available | Positive | 522155 - 523435 | 42566.7 |
| conjugal transfer protein trbf | AN936_RS02585 | Not Available | Positive | 523442 - 524125 | 25318.9 |
| p-type conjugative transfer protein trbg | AN936_RS02590 | P54915 | Positive | 524122 - 524973 | 30786.8 |
| trbi/virb10 family protein | AN936_RS02595 | P55406 | Positive | 525102 - 526178 | 37201.3 |
| duf2274 domain-containing protein | AN936_RS02600 | Not Available | Positive | 526175 - 526396 | 8045.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
