Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein trae | AN936_RS22650 | Not Available | Positive | 97121 - 97687 | 20826.3 |
| type-f conjugative transfer system secretin trak | AN936_RS22655 | Not Available | Positive | 97684 - 98484 | 28238.8 |
| trab/virb10 family protein | AN936_RS22660 | Not Available | Positive | 98490 - 99779 | 45408.8 |
| dsbc family protein | AN936_RS22665 | Not Available | Positive | 99788 - 100633 | 29849.8 |
| hypothetical protein | AN936_RS22670 | Not Available | Positive | 100630 - 101340 | 24032.6 |
| type iv secretion system protein trac | AN936_RS22675 | Not Available | Positive | 101347 - 103920 | 95079.7 |
| hypothetical protein | AN936_RS22680 | Not Available | Positive | 103917 - 104294 | 13481.7 |
| trbi f-type domain-containing protein | AN936_RS22685 | Not Available | Positive | 104291 - 104842 | 19338.9 |
| s26 family signal peptidase | AN936_RS22690 | Not Available | Positive | 104952 - 105428 | 16922.7 |
| type-f conjugative transfer system protein traw | AN936_RS22695 | Not Available | Positive | 105497 - 106087 | 21735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
