Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | AN936_RS22410 | Not Available | Positive | 40065 - 41431 | 52702.2 |
| transposase | AN936_RS22415 | Not Available | Negative | 41709 - 41948 | 9271.16 |
| gnat family n-acetyltransferase | AN936_RS22420 | Not Available | Positive | 42188 - 42736 | 21045.5 |
| hypothetical protein | AN936_RS25680 | Q9KWM8 | Positive | 42966 - 43169 | 7130.83 |
| four-helix bundle copper-binding protein | AN936_RS22430 | Not Available | Negative | 43204 - 43536 | 12052.6 |
| is630 family transposase | AN936_RS24435 | P55614 | Positive | 43905 - 44965 | 39832.9 |
| type iv secretion system dna-binding domain-containing protein | AN936_RS22445 | P58379 | Negative | 44982 - 45269 | 10872.2 |
| type iv secretion system dna-binding domain-containing protein | AN936_RS24440 | Not Available | Positive | 45423 - 45917 | 19122.9 |
| is256-like element isspma2 family transposase | AN936_RS22450 | Not Available | Negative | 45969 - 47183 | 45544.2 |
| type iv secretion system dna-binding domain-containing protein | AN936_RS22455 | Not Available | Positive | 47342 - 49867 | 97284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
