Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | AN936_RS24395 | Not Available | Negative | 19119 - 20033 | 33383.1 |
| lytic transglycosylase domain-containing protein | AN936_RS24400 | O31608 | Positive | 20221 - 21102 | 31873.9 |
| hypothetical protein | AN936_RS22330 | Not Available | Negative | 21082 - 21357 | 10405.9 |
| helix-turn-helix domain-containing protein | AN936_RS22335 | Not Available | Negative | 21367 - 22569 | 43764.2 |
| is3 family transposase | AN936_RS22340 | P37007 | Negative | 22722 - 24085 | 52503.9 |
| cation diffusion facilitator family transporter | AN936_RS22350 | P13512 | Negative | 24138 - 25019 | 31721.8 |
| cation diffusion facilitator family transporter | AN936_RS22355 | Not Available | Negative | 25016 - 25654 | 22718.9 |
| efflux rnd transporter permease subunit | AN936_RS22360 | Q44586 | Negative | 25764 - 29018 | 115358.0 |
| efflux rnd transporter periplasmic adaptor subunit | AN936_RS22365 | Q44585 | Negative | 29089 - 30237 | 39575.9 |
| tolc family protein | AN936_RS22370 | P13509 | Negative | 30249 - 31463 | 42422.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
