Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsd1 family plp-dependent enzyme | AN936_RS22185 | A1B8Z1 | Positive | 4744067 - 4745212 | 39194.8 |
| tetr/acrr family transcriptional regulator | AN936_RS22190 | Not Available | Positive | 4745209 - 4745835 | 22717.6 |
| penicillin-binding protein 1a | AN936_RS22195 | Q1RKC5 | Positive | 4745892 - 4748408 | 92282.5 |
| peptide chain release factor 2 | AN936_RS22200 | Q2W3F8 | Positive | 4748482 - 4749609 | 41362.5 |
| class i sam-dependent methyltransferase | AN936_RS22205 | Not Available | Positive | 4749609 - 4750325 | 26130.2 |
| dsre family protein | AN936_RS22210 | Not Available | Negative | 4750595 - 4750960 | 12172.9 |
| hesa/moeb/thif family protein | AN936_RS22215 | Q56067 | Negative | 4750948 - 4751697 | 25935.3 |
| dutp diphosphatase | AN936_RS22220 | A5VG00 | Negative | 4751796 - 4752257 | 15941.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AN936_RS22225 | Q87T89 | Negative | 4752220 - 4753482 | 44132.1 |
| ccdb family protein | AN936_RS22230 | Not Available | Negative | 4753485 - 4753781 | 10865.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
