Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AN936_RS21465 | P96825 | Positive | 4608172 - 4609059 | 31021.3 |
| smi1/knr4 family protein | AN936_RS21470 | O14362 | Negative | 4609260 - 4609589 | 12138.5 |
| hypothetical protein | AN936_RS21475 | Not Available | Positive | 4610276 - 4610620 | 12774.1 |
| hypothetical protein | AN936_RS25645 | Not Available | Negative | 4610726 - 4611049 | 12097.5 |
| murein l,d-transpeptidase catalytic domain-containing protein | AN936_RS21480 | Not Available | Positive | 4610936 - 4611382 | 16295.4 |
| Trna-glu | Not Available | Not Available | Positive | 4611802 - 4611876 | Not Available |
| amino acid permease | AN936_RS21490 | Not Available | Negative | 4611935 - 4613359 | 49342.3 |
| ldh family oxidoreductase | AN936_RS21495 | Q9I492 | Positive | 4613504 - 4614529 | 35287.4 |
| gntr family transcriptional regulator | AN936_RS21500 | P54988 | Negative | 4614552 - 4615211 | 24667.4 |
| fad-binding oxidoreductase | AN936_RS21505 | A4JCJ3 | Negative | 4615282 - 4616529 | 43258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
