Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AN936_RS21020 | Not Available | Negative | 4511464 - 4512687 | 42071.6 |
| hypothetical protein | AN936_RS21025 | Not Available | Negative | 4512759 - 4513130 | 14121.9 |
| metalloprotease tldd | AN936_RS21030 | P0AGG9 | Negative | 4513132 - 4514574 | 50625.0 |
| duf4402 domain-containing protein | AN936_RS21035 | Not Available | Negative | 4514806 - 4515360 | 17840.2 |
| hypothetical protein | AN936_RS21040 | Not Available | Negative | 4515443 - 4515922 | 18485.7 |
| zinc-finger domain-containing protein | AN936_RS21045 | Not Available | Negative | 4516175 - 4516378 | 7064.3 |
| ku protein | AN936_RS21050 | A4Z012 | Positive | 4516510 - 4517400 | 32530.4 |
| dna ligase d | AN936_RS21055 | Q9I1X7 | Positive | 4517402 - 4519918 | 91392.2 |
| duf779 domain-containing protein | AN936_RS21060 | Not Available | Negative | 4520087 - 4520449 | 12865.2 |
| aldehyde dehydrogenase | AN936_RS21065 | A1B4L2 | Negative | 4520503 - 4522026 | 55597.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
