Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | AN936_RS20875 | Not Available | Positive | 4481915 - 4482463 | 18696.2 |
| dna polymerase iii subunit delta | AN936_RS20880 | Not Available | Positive | 4482470 - 4483501 | 36034.7 |
| sodium:proton antiporter | AN936_RS20885 | Not Available | Negative | 4483538 - 4485352 | 65126.3 |
| tonb-dependent receptor | AN936_RS20890 | Not Available | Negative | 4485681 - 4488500 | 100409.0 |
| ligase-associated dna damage response endonuclease pdem | AN936_RS20895 | Not Available | Negative | 4488661 - 4489377 | 25306.1 |
| retroviral-like aspartic protease family protein | AN936_RS20900 | Not Available | Negative | 4489396 - 4490454 | 37769.0 |
| cold-shock protein | AN936_RS25835 | Q1RHK6 | Negative | 4490734 - 4491522 | 27060.2 |
| ribonuclease d | AN936_RS20910 | Not Available | Positive | 4491784 - 4492401 | 22611.9 |
| lps export abc transporter periplasmic protein lptc | AN936_RS20915 | Not Available | Positive | 4492417 - 4493055 | 22684.4 |
| lpta/osta family protein | AN936_RS20920 | Not Available | Positive | 4493052 - 4493627 | 19710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
