Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AN936_RS20370 | B8IHY5 | Negative | 4392311 - 4393153 | 29290.0 |
| pyrimidine 5'-nucleotidase | AN936_RS20375 | Not Available | Negative | 4393150 - 4393827 | 25279.0 |
| amidohydrolase family protein | AN936_RS20380 | Not Available | Positive | 4393988 - 4395280 | 44309.1 |
| dna-deoxyinosine glycosylase | AN936_RS20385 | Q46EH7 | Negative | 4395389 - 4395889 | 18040.8 |
| 30s ribosomal protein s12 | AN936_RS20390 | Q1GP94 | Positive | 4396194 - 4396565 | 13891.1 |
| 30s ribosomal protein s7 | AN936_RS20395 | Q1GP95 | Positive | 4396639 - 4397109 | 17711.3 |
| elongation factor g | AN936_RS20400 | Q1GP96 | Positive | 4397203 - 4399296 | 76649.3 |
| elongation factor tu | AN936_RS20405 | Q1GP97 | Positive | 4399415 - 4400608 | 42983.7 |
| 30s ribosomal protein s10 | AN936_RS20410 | Q1GP98 | Positive | 4400756 - 4401067 | 11677.3 |
| 50s ribosomal protein l3 | AN936_RS20415 | Q1GP99 | Positive | 4401343 - 4402116 | 27275.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
