Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | AN936_RS20270 | Not Available | Negative | 4374352 - 4374645 | 11168.4 |
| transcription termination factor rho | AN936_RS20275 | P52156 | Negative | 4374655 - 4375911 | 46529.9 |
| copd family protein | AN936_RS20280 | Q9ZC85 | Negative | 4376110 - 4376556 | 17006.6 |
| uroporphyrinogen decarboxylase | AN936_RS20285 | Q1GP74 | Negative | 4376560 - 4377588 | 36519.8 |
| pyruvate, water dikinase regulatory protein | AN936_RS20290 | Q1GP75 | Positive | 4377938 - 4378750 | 29886.8 |
| maf family protein | AN936_RS20295 | Q1GP76 | Positive | 4378747 - 4379346 | 21201.4 |
| shikimate dehydrogenase | AN936_RS20300 | Q1GP77 | Positive | 4379343 - 4380161 | 28161.1 |
| dephospho-coa kinase | AN936_RS20305 | Q2GC60 | Positive | 4380158 - 4380781 | 22820.1 |
| dna polymerase iii subunit epsilon | AN936_RS20310 | Q1RJM1 | Positive | 4380801 - 4381499 | 25216.3 |
| ribosome hibernation-promoting factor, hpf/yfia family | AN936_RS20315 | P17265 | Positive | 4381547 - 4382119 | 20796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
