Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | AN936_RS19925 | Not Available | Negative | 4303006 - 4303890 | 33637.2 |
| pd-(d/e)xk nuclease family protein | AN936_RS19930 | Not Available | Positive | 4304094 - 4306748 | 95062.2 |
| exodeoxyribonuclease v subunit beta | AN936_RS19935 | Q03D71 | Positive | 4306745 - 4310137 | 122096.0 |
| sir2 family protein | AN936_RS19940 | Not Available | Positive | 4310210 - 4311136 | 32903.6 |
| is256-like element isspma2 family transposase | AN936_RS19945 | P60231 | Positive | 4311269 - 4312483 | 45544.2 |
| hypothetical protein | AN936_RS19950 | Not Available | Positive | 4312519 - 4312863 | 12176.2 |
| atp-binding protein | AN936_RS19955 | Q8U1P0 | Positive | 4312860 - 4314488 | 58544.7 |
| is256 family transposase | AN936_RS19960 | Q52873 | Negative | 4314415 - 4315638 | 45726.9 |
| ktsc domain-containing protein | AN936_RS24330 | Not Available | Positive | 4316099 - 4316311 | 7749.06 |
| Trna-arg | Not Available | Not Available | Positive | 4316546 - 4316622 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
